ImputeGAP is a comprehensive Python library for imputation of missing values in time series data. It implements user-friendly APIs to easily visualize, analyze, and repair incomplete time series datasets.
Tool for finding interesting forks of projects on GitHub.
Pangenome-Analysis.py is written for extraction of core, accessory and unique genomes (Gene families and proteins) along with filtration of single copy orthologues, creation of binary and count matrices as well as removal of duplicates.
NMR spectroscopy software for line shape fitting and downstream analysis
SCRY is a web-based application designed to make downstream scRNA-seq-analysis more accessible.
Nextflow DSL2 pipeline for bulk mRNA-seq differential expression analysis using the limma-voom statistical framework with integrated batch correction, pathway analysis, and power assessment.
This repository contains the source code of the python shiny app which is recommended to be used for the downstream analysis of the output of the SIMBA🦁 pipeline.
A Shiny application for creating deeptools plots (heatmap, profile) from bigwigs and bed files in HiPerGator storage
Nextflow pipeline for MS-DAP, a downstream pipeline to generate statistical reports for MS data
R Shiny app to produce a heatmap of LCPM (e.g.) for genes in a pathway of interest
🧬 What are the three stages of NGS/Omics (WGS/WES) data analysis? How do you start, and keep your workflow stress-free and organized? 📒
Add a description, image, and links to the downstream-analysis topic page so that developers can more easily learn about it.
To associate your repository with the downstream-analysis topic, visit your repo's landing page and select "manage topics."