Skip to content
@mahmoodlab

Mahmood Lab @ Harvard/MGB

AI for Pathology Image Analysis Lab @ HMS / BWH

Pinned Loading

  1. CLAM CLAM Public

    Open source tools for computational pathology - Nature BME

    Python 1.6k 485

  2. TRIDENT TRIDENT Public

    Toolkit for large-scale whole-slide image processing.

    Python 487 106

  3. TITAN TITAN Public

    Multimodal Whole Slide Foundation Model for Pathology

    Python 312 30

  4. UNI UNI Public

    Pathology Foundation Model - Nature Medicine

    Jupyter Notebook 677 83

  5. CONCH CONCH Public

    Vision-Language Pathology Foundation Model - Nature Medicine

    Python 471 49

  6. MIL-Lab MIL-Lab Public

    Feather - Lightweight supervised slide foundation models (ICML 2025)

    Python 133 22

Repositories

Showing 10 of 35 repositories
  • SEAL Public

    Spatial Expression-Aligned Learning to improve pathology foundation models

    mahmoodlab/SEAL’s past year of commit activity
    12 1 0 0 Updated Feb 17, 2026
  • TRIDENT Public

    Toolkit for large-scale whole-slide image processing.

    mahmoodlab/TRIDENT’s past year of commit activity
    Python 487 106 25 (1 issue needs help) 11 Updated Feb 16, 2026
  • HEST Public

    Integrating histology and spatial transcriptomics - NeurIPS 2024

    mahmoodlab/HEST’s past year of commit activity
    Python 367 41 21 0 Updated Feb 8, 2026
  • MIL-Lab Public

    Feather - Lightweight supervised slide foundation models (ICML 2025)

    mahmoodlab/MIL-Lab’s past year of commit activity
    Python 133 22 1 0 Updated Feb 5, 2026
  • TITAN Public

    Multimodal Whole Slide Foundation Model for Pathology

    mahmoodlab/TITAN’s past year of commit activity
    Python 312 30 1 0 Updated Dec 13, 2025
  • Patho-Bench Public

    Standardized benchmark for computational pathology foundation models.

    mahmoodlab/Patho-Bench’s past year of commit activity
    Python 130 27 7 0 Updated Nov 7, 2025
  • KRONOS Public

    Foundation Model for Multiplex Spatial Proteomic Images

    mahmoodlab/KRONOS’s past year of commit activity
    Jupyter Notebook 177 28 2 1 Updated Aug 21, 2025
  • CLAM Public

    Open source tools for computational pathology - Nature BME

    mahmoodlab/CLAM’s past year of commit activity
    Python 1,609 GPL-3.0 485 34 12 Updated Apr 14, 2025
  • UNI Public

    Pathology Foundation Model - Nature Medicine

    mahmoodlab/UNI’s past year of commit activity
    Jupyter Notebook 677 83 29 2 Updated Mar 26, 2025
  • CONCH Public

    Vision-Language Pathology Foundation Model - Nature Medicine

    mahmoodlab/CONCH’s past year of commit activity
    Python 471 49 14 2 Updated Mar 26, 2025
View all repositories

People

This organization has no public members. You must be a member to see who’s a part of this organization.