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[E2E] Test Chemoproteomics Workflow with Various Datasets

Status: Open.

#183 In Vitek-Lab/MSstatsShiny;

· tonywu1999 opened on Apr 3, 2026

Enable Protein Turnover for MSstatsShiny

Status: Open.

#179 In Vitek-Lab/MSstatsShiny;

· tonywu1999 opened on Mar 13, 2026

[E2E] Process PTM Dataset with Response Curves

Status: Open.

#170 In Vitek-Lab/MSstatsShiny;

· tonywu1999 opened on Feb 19, 2026

[BioNet] Integrate MSstatsResponse with Network Visualization

Status: Open.

#169 In Vitek-Lab/MSstatsShiny;

· tonywu1999 opened on Feb 19, 2026

[Sample-Size] Integrate sample size calculation into MSstatsShiny

enhancementNew feature or requestNew feature or request

Status: Open.

Feature

#167 In Vitek-Lab/MSstatsShiny;

· tonywu1999 opened on Feb 19, 2026

Use PeakArea vs NormalizedPeakArea vs FGMS1Quantity for Spectronaut

Status: Open.

#162 In Vitek-Lab/MSstatsShiny;

· tonywu1999 opened on Feb 19, 2026

Refactor Loadpage UI & Server to Read First 100 Rows Upon Upload

Status: Open.

#160 In Vitek-Lab/MSstatsShiny;

· tonywu1999 opened on Feb 19, 2026

Bioconductor Release 3.23 Chemoproteomics Updates

Status: Open.

#159 In Vitek-Lab/MSstatsShiny;

· tonywu1999 opened on Feb 19, 2026

column mapping issue for DIANN output files

Status: Open.

#157 In Vitek-Lab/MSstatsShiny;

· mhmd-tarek opened on Feb 19, 2026

Add ProteinProspectorToMSstatsPTM Function to MSstatsShiny

Status: Open.

#149 In Vitek-Lab/MSstatsShiny;

· tonywu1999 opened on Jan 13, 2026

Add ProteinProspectorToMSstatsTMTFormat Function to MSstatsShiny

Status: Open.

#147 In Vitek-Lab/MSstatsShiny;

· tonywu1999 opened on Jan 13, 2026

Integrate new converters to MSstatsShiny

Status: Open.

#146 In Vitek-Lab/MSstatsShiny;

· tonywu1999 opened on Jan 13, 2026