-
Notifications
You must be signed in to change notification settings - Fork 0
Expand file tree
/
Copy pathbenchmark.html
More file actions
144 lines (105 loc) · 5.42 KB
/
benchmark.html
File metadata and controls
144 lines (105 loc) · 5.42 KB
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
<!DOCTYPE html>
<html>
<head>
<meta charset="utf-8">
<meta http-equiv="x-ua-compatible" content="ie=edge">
<meta name="viewport" content="width=device-width, initial-scale=1">
<title>Benchmark</title>
<link rel="stylesheet" href="/assets/css/readdy_documentation.css">
<link rel="canonical" href="https://readdy.github.io/benchmark.html">
<link href="https://fonts.googleapis.com/css?family=Inconsolata|Roboto+Mono|Lora|Lato|Source+Sans+Pro|Roboto+Slab|Merriweather" rel="stylesheet">
<link rel="stylesheet" href="https://readdy.github.io/libraries/perfect-scrollbar/css/perfect-scrollbar.min.css"/>
<link rel="stylesheet" href="https://cdn.jsdelivr.net/npm/katex@0.10.1/dist/katex.min.css" integrity="sha384-dbVIfZGuN1Yq7/1Ocstc1lUEm+AT+/rCkibIcC/OmWo5f0EA48Vf8CytHzGrSwbQ" crossorigin="anonymous">
<script defer src="https://cdn.jsdelivr.net/npm/katex@0.10.1/dist/katex.min.js" integrity="sha384-2BKqo+exmr9su6dir+qCw08N2ZKRucY4PrGQPPWU1A7FtlCGjmEGFqXCv5nyM5Ij" crossorigin="anonymous"></script>
<script defer src="https://cdn.jsdelivr.net/npm/katex@0.10.1/dist/contrib/auto-render.min.js"></script>
<script>
document.addEventListener("DOMContentLoaded", function() {
renderMathInElement(document.body, {
delimiters: [
{left: "$$", right: "$$", display: true},
{left: "$", right: "$", display: false},
{left: "\\[", right: "\\]", display: true},
{left: "\\(", right: "\\)", display: false},
]
});
});
</script>
<link rel="icon" type="image/png" href="/assets/icon_black_32px.png">
</head>
<body>
<div class="side-wrapper" id="unique-side-container">
<div class="side">
<div class="side-logo logo-readdy"><a href="https://readdy.github.io/index.html"></a></div>
<div style="margin-right: 1.5rem; text-align: center;">
<a href="https://readdy.github.io/index.html">ReaDDy - A particle-based<br>reaction-diffusion simulator</a>
</div>
<div class="side-searchbar-wrapper">
<form action="https://readdy.github.io/search.html" method="get">
<input type="text" id="search-box" name="query" placeholder="Search ...">
</form>
</div>
<nav class="side-nav">
<a class="side-nav-item" href="https://readdy.github.io/index.html">Home</a>
<a class="side-nav-item" href="https://readdy.github.io/installation.html">Install readdy</a>
<div class="nav-supergroup-delimiter">
<b>API</b>
</div>
<a class="side-nav-item" href="https://readdy.github.io/system.html">System configuration</a>
<a class="side-nav-item" href="https://readdy.github.io/simulation.html">Simulation</a>
<a class="side-nav-item" href="https://readdy.github.io/results.html">Post-processing</a>
<div class="nav-supergroup-delimiter">
<b>Examples</b>
</div>
<a class="side-nav-item" href="https://readdy.github.io/demonstration.html">Demonstration</a>
<a class="side-nav-item" href="https://readdy.github.io/validation.html">Validation</a>
<a class="side-nav-item active" href="https://readdy.github.io/benchmark.html">Benchmark</a>
<a class="side-nav-sub-item" href="https://readdy.github.io/benchmark/michaelis_menten">
Michaelis-Menten - well mixed
</a>
<a class="side-nav-sub-item" href="https://readdy.github.io/benchmark/cytosolic_reactions">
Cytosolic reactions
</a>
<div class="nav-supergroup-delimiter">
<b>Advanced topics</b>
</div>
<a class="side-nav-item" href="https://readdy.github.io/cookbook.html">Cookbook</a>
<a class="side-nav-item" href="https://readdy.github.io/development.html">Development</a>
<div class="nav-supergroup-delimiter">
<b>Legal notices</b>
</div>
<a class="side-nav-item" href="https://readdy.github.io/imprint.html">Imprint</a>
<a class="side-nav-item" href="https://readdy.github.io/software_license.html">Software license</a>
</nav>
<div class="github-wrapper">
<a href="https://github.com/readdy/readdy" style="width: 16rem; height:100%; position:absolute; top:0; left:0;">
<div class="github-text">ReaDDy on GitHub</div>
<div class="side-logo logo-github"></div>
</a>
</div>
<div class="side-logo logo-cmb"><a href="https://www.mi.fu-berlin.de/en/math/groups/comp-mol-bio/"></a></div>
</div>
</div>
<div class="main-container" id="unique-main-container">
<div class="main">
<article>
<h1 style="font-size: 2.7rem; padding-left: 0.5rem;">Benchmark</h1>
<ul>
<li>
<p><a href="https://readdy.github.io/benchmark/michaelis_menten">Michaelis-Menten - well mixed
</a></p>
</li>
<li>
<p><a href="https://readdy.github.io/benchmark/cytosolic_reactions">Cytosolic reactions
</a></p>
</li>
</ul>
</article>
<div class="foot">
© Copyright 2020 <a href="https://www.mi.fu-berlin.de/en/math/groups/comp-mol-bio/">AI4Science (former CMB) Group</a>
</div>
</div>
</div>
<script src="https://readdy.github.io/libraries/perfect-scrollbar/js/perfect-scrollbar.min.js"></script>
<script src="https://readdy.github.io/assets/js/scrollbar.js"></script>
</body>
</html>